EMBOSS explorer

polydot

Displays all-against-all dotplots of a set of sequences (read the manual)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Required section
Word size
Output section
Gap (in residues) between dotplots
Draw a box around each dotplot?
Dump all matches as feature files?
Output feature format
Separate files for each entry?
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.