EMBOSS explorer

cpgplot

Plot CpG rich areas (read the manual)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Required section
Window size
Minimum length of an island
Minimum observed/expected
Minimum percentage
Output section
Show observed/expected threshold line?
Show CpG rich regions?
Show percentage line?
Output feature format
Separate files for each entry?
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.