EMBOSS explorer

trimseq

Trim ambiguous bits off the ends of sequences (read the manual)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Additional section
Window size
Percent threshold of ambiguity in window
Trim off all ambiguity codes, not just N or X?
Trim off asterisks?
Advanced section
Trim at the start?
Trim at the end?
Output section
Output sequence format
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.